I'm doing this same thing but replacing the current rafter ties with collar ties (top 1/3rd instead of bottom third). At the rafter/top plate connection, I'm attaching hurricane ties. Because I'm removing the rafter ties, I'm replacing them with steel cable let through the double top plate on either side backed up with steel plates to keep the ends from pulling back through. I also added a support post from the footing to the ridge.
I wanted a higher unobstructed ceiling, but the steel cable is a nice compromise.