I was hoping I could figure this out but it looks like I will have to get the contractor to help. He was rated highly on Angie's List and will take care of it if it was something that was not done exactly right when installed. I am just so happy that this got discovered now before it turned to rotten wood. I would hate to see what to would take to repair the bottom of walls.
Thanks to everyone for the tips and help. I will post what wqs found and the fix.
Sometimes decisions from the heart are better than decisions from the brain.
Enjoy Life...