It used to do that Mike, that's why I mentioned it. That's actually why I never used it much, because it would run 1 cycle and delete itself. Looks like they have changed that so it doesn't delete itself after running now.
I opened JC and sent a job over with QP and it worked perfectly. It didn't pull any jobs from the queue. Sounds to me like something is corrupt, which could explain the long send times.
One thing I found years ago, when we were beta testing it was that some jobs were huge in the spool file, which would slow the processing down. We were seeing jobs that were very small end up being 100mb or more when they hit the spool file. That was some bug in the color setting. If you selected anything other than color, the file size was small, select color and some files, not every one, would get massive for no apparently reason. That was addressed before they even released the first version to the public though, and I haven't seen that issue since then. I did a quick check of my spool files and I don't see anything like that, and we use color all the time.
What version of JCX are you running? Sounds like a reinstall of the software might be due because you aren't getting normal behavior.
As far as one offs or production, I'd say we do a mix of both and haven't had any issues running 1 off jobs all day long. Maybe if we can get the QP working right and the send times fixed, you'll feel it's up for your 1 off jobs all day long.
Just to clarify, what you are seeing isn't normal by any means and it needs to be fixed!